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BaseSpace™ Sequence Hub

Cloud-based data management and simplified bioinformatics for labs that are getting started and rapidly scaling next-generation sequencing.

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News and Updates
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BD Rhapsody TCR/BCR Profiling Assay data on the NextSeq™ 2000 – 600 cycles kit are now available on Illumina BaseSpace™ Sequence Hub!
  • BaseSpace™ Sequence Hub
  • Publications
  • News
  • 09/27/2023

Today, we are excited to present that NextSeq 2000 data on the newly launched 600 cycles sequencing kits with the BD Rhapsody TCR/BCR Profiling Assay ...

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Post-sequencing auto-launch DRAGEN™ single cell RNA analysis now enabled for Singleron GEXSCOPE single cell library on Illumina NextSeq™ 2000.
  • DRAGEN
  • BaseSpace™ Sequence Hub
  • Publications
  • News
  • 09/19/2023

In collaboration with Singleron Biotechnologies, here we show a streamlined workflow with auto launching onboard DRAGEN Single Cell RNA analysis after...

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NSTG ILMN blog cover
Spatial Proteogenomics NanoString GeoMx® Digital Spatial Profiler datasets now available on Illumina® BaseSpace™ Sequence Hub
  • BaseSpace™ Sequence Hub
  • Publications
  • News
  • 08/31/2023

NanoString and Illumina have collaborated to release two new demo datasets of GeoMx Digital Spatial Profiler (DSP) data on the Illumina BaseSpace Sequ...

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How-To Videos
How to Requeue a Run How to Requeue a Run
Command Line Interface - Getting Started Command Line Interface - Getting Started
Command Line Interface - Uploading Runs Command Line Interface - Uploading Runs
Command Line Interface - Uploading and downloading FASTQ files Command Line Interface - Uploading and downloading FASTQ files