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BaseSpace™ Sequence Hub

Cloud-based data management and simplified bioinformatics for labs that are getting started and rapidly scaling next-generation sequencing.

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Developer Resources
News and Updates
Chromium single cell gene expression flex
10x Genomics’ Chromium Single Cell Gene Expression Flex data now available on Illumina® BaseSpace™ Sequence Hub
  • BaseSpace™ Sequence Hub
  • News
  • 03/20/2023

Today, we are excited to announce that we have published sequencing data for 10x Genomics’ Chromium Single Cell Gene Expression Flex on BaseSpace™ Seq...

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210805 NEB Next Immune kits 1
New England Biolabs NEBNext Immune Sequencing Kit data now available on the new NextSeq™ 2000 600 cycles kit
  • BaseSpace™ Sequence Hub
  • Product updates
  • News
  • 01/17/2023

In this blogpost, we are showcasing NextSeq 2000 data with the NEBNext Immune Sequencing Kits, using the newly launched 600 cycles sequencing kits.

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Picture13
HIVE single cell RNAseq libraries data from Honeycomb Biotechnologies are now available on Illumina BaseSpace™ Sequence Hub demo data page!
  • BaseSpace™ Sequence Hub
  • Publications
  • News
  • 01/06/2023

In this blog, we are presenting NextSeqTM 2000 sequencing run data for HIVE scRNAseq libraries from Honeycomb Biotechnologies.

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How-To Videos
How to Requeue a Run How to Requeue a Run
Command Line Interface - Getting Started Command Line Interface - Getting Started
Command Line Interface - Uploading Runs Command Line Interface - Uploading Runs
Command Line Interface - Uploading and downloading FASTQ files Command Line Interface - Uploading and downloading FASTQ files