BSSH monitor laptop
  • Home
  • BaseSpace™ Sequence Hub

BaseSpace™ Sequence Hub

Cloud-based data management and simplified bioinformatics for labs that are getting started and rapidly scaling next-generation sequencing.

Get started
Developer Resources
Application Support - Infectious Disease & Microbiology
News and Updates
Screenshot 2026 08 04 at 9 45 13 AM
A Simpler Way to Evolve with Illumina Software

Illumina is simplifying how customers buy and use software. One platform, one credit currency, usage that scales with you. Here’s what it means for yo...

Read article
Cover bioomodal
biomodal’s duet multiomics solution +modC data now available on Illumina BaseSpace™ Sequence Hub
  • BaseSpace™ Sequence Hub
  • Publications
  • News
  • 03/19/2024

Discover the combinatorial power of genetics and epigenetics at single base resolution. We are delighted to present BaseSpace Sequence Hub data on the...

Read article
Hires nextseq2000 front 1
Spatial transcriptomics data from Curio Bioscience is now available on BaseSpace™ Sequence Hub
  • BaseSpace™ Sequence Hub
  • Publications
  • News
  • 03/14/2024

Today, we announce the availability of NextSeq™ 2000 data on BaseSpace Sequence Hub from Curio Bioscience, a partner that develops high-precision tool...

Read article
Learn more
How-To Videos
How to Requeue a Run How to Requeue a Run
Command Line Interface - Getting Started Command Line Interface - Getting Started
Command Line Interface - Uploading Runs Command Line Interface - Uploading Runs
Command Line Interface - Uploading and downloading FASTQ files Command Line Interface - Uploading and downloading FASTQ files